在Circos图外添加额外的轨道(Circlize,Chorddiagram)

发布于 2025-02-11 09:58:31 字数 693 浏览 2 评论 0原文

我正在尝试重新创建下面的这一图,其中“到”变量(IE目标基因)进一步分为外部(标记)类别(IE受体)。

我已经生成了一些示例数据,不幸的是,我不确定其他外部类别需要哪种格式,但是它可能与链接格式相距不远。

library(circlize)

links <- data.frame(from = c("A", "B", "C", "B", "C"),
                     to = c("D", "E", "F", "D", "E"),
                    value = c(1, 1, 1, 1, 1))

categories <- data.frame(from = c("D", "E", "F", "D", "E"),
                         to = c("X", "X", "Y", "Y", "Y"),
                         value = c(1, 1, 1, 1, 1))

chordDiagram(links)

任何帮助都非常感谢!

I'm trying to recreate this figure below, where the "to" variable (i.e. target genes) is further grouped into outer (labelled) categories (i.e. receptors).

enter image description here

I have generated some example data, unfortunately I'm not sure what format is needed for the additional outer categories, but it's possibly not far off the link format.

library(circlize)

links <- data.frame(from = c("A", "B", "C", "B", "C"),
                     to = c("D", "E", "F", "D", "E"),
                    value = c(1, 1, 1, 1, 1))

categories <- data.frame(from = c("D", "E", "F", "D", "E"),
                         to = c("X", "X", "Y", "Y", "Y"),
                         value = c(1, 1, 1, 1, 1))

chordDiagram(links)

Any assistance greatly appreciated!

如果你对这篇内容有疑问,欢迎到本站社区发帖提问 参与讨论,获取更多帮助,或者扫码二维码加入 Web 技术交流群。

扫码二维码加入Web技术交流群

发布评论

需要 登录 才能够评论, 你可以免费 注册 一个本站的账号。
列表为空,暂无数据
我们使用 Cookies 和其他技术来定制您的体验包括您的登录状态等。通过阅读我们的 隐私政策 了解更多相关信息。 单击 接受 或继续使用网站,即表示您同意使用 Cookies 和您的相关数据。
原文