如何为(基本R)散点图定义固定的方面比例

发布于 2025-01-31 13:26:32 字数 1852 浏览 2 评论 0原文

我正在绘制相关系数(值= 0.0:1.0)的两个同位素在每个人群中测得的两个同位素。我想为我的散点图有一个固定的方面比例,以使x-和y轴与图形设备的大小完全相同。建议?

这是我在R中的第一个情节,对我的代码的改进有任何评论吗?最后,是否值得投资学习基本的绘图技术,或者我应该直接跳到GGPLOT2或晶格?

我的情节脚本:

## Create dataset
WW_corr <-
structure(list(South_N15 = c(0.7976495, 0.1796725, 0.5338347,
0.4103769, 0.7447027, 0.5080296, 0.7566544, 0.7432026, 0.8927161
), South_C13 = c(0.76706752, 0.02320767, 0.88429902, 0.36648357,
0.73840937, 0.0523504, 0.52145159, 0.50707858, 0.51874445), North_N15 = c(0.7483608,
0.4294148, 0.9283554, 0.8831571, 0.5056481, 0.1945943, 0.8492716,
0.5759033, 0.7483608), North_C13 = c(0.08114805, 0.47268136,
0.94975596, 0.06023815, 0.33652839, 0.53055943, 0.30228833, 0.8864435,
0.08114805)), .Names = c("South_N15", "South_C13", "North_N15",
"North_C13"), row.names = c(NA, -9L), class = "data.frame")

opar <- par()

## Plot results
par(oma = c(1, 0, 0, 0), mar = c(4, 5, 2, 2))           
plot(1,1,xlim=c(0:1.0), ylim=c(0:1.0), type="n", las=1, bty="n", main = NULL,
     ylab=expression(paste("Correlation Coefficient (r) for ", delta ^{15},"N ",
                     "\u0028","\u2030","\u0029")),
     xlab=expression(paste("Correlation Coefficient (r) for ", delta ^{13},"C ",
                     "\u0028","\u2030","\u0029")))

points(WW_corr$South_N15, WW_corr$South_C13, pch = 23, cex = 1.25, 
       bg ="antiquewhite4", col = "antiquewhite4")
points(WW_corr$North_N15, WW_corr$North_C13, pch = 15, cex = 1.25,
       bg ="black")
axis(1, at = seq(0, 1.0, by = 0.1), labels = F, tick = TRUE, tck = -0.01)
axis(2, at = seq(0, 1.0, by = 0.1), labels = F, tick = TRUE, tck = -0.01)
abline(h=.86, v=.86, col = "gray60", lty = 2)
legend("topleft", c("North", "South"), pch = c(15, 23), 
       col = c("black", "antiquewhite4"), pt.bg = c("black", "antiquewhite4"),
       horiz=TRUE, bty = "n")

par(opar)

I am plotting correlation coefficients (values = 0.0:1.0) for two isotopes measured in each individual from two populations. I would like to have a fixed aspect-ratio for my scatter-plot so that the x- and y-axis are exactly the same size no matter the graphics device. Suggestions?

This is my first plot in R, any comments on refinements to my code is appreciated? Finally, is it worth investing in learning the basic plotting techniques or should I jump right to ggplot2 or lattice?

My plot script:

## Create dataset
WW_corr <-
structure(list(South_N15 = c(0.7976495, 0.1796725, 0.5338347,
0.4103769, 0.7447027, 0.5080296, 0.7566544, 0.7432026, 0.8927161
), South_C13 = c(0.76706752, 0.02320767, 0.88429902, 0.36648357,
0.73840937, 0.0523504, 0.52145159, 0.50707858, 0.51874445), North_N15 = c(0.7483608,
0.4294148, 0.9283554, 0.8831571, 0.5056481, 0.1945943, 0.8492716,
0.5759033, 0.7483608), North_C13 = c(0.08114805, 0.47268136,
0.94975596, 0.06023815, 0.33652839, 0.53055943, 0.30228833, 0.8864435,
0.08114805)), .Names = c("South_N15", "South_C13", "North_N15",
"North_C13"), row.names = c(NA, -9L), class = "data.frame")

opar <- par()

## Plot results
par(oma = c(1, 0, 0, 0), mar = c(4, 5, 2, 2))           
plot(1,1,xlim=c(0:1.0), ylim=c(0:1.0), type="n", las=1, bty="n", main = NULL,
     ylab=expression(paste("Correlation Coefficient (r) for ", delta ^{15},"N ",
                     "\u0028","\u2030","\u0029")),
     xlab=expression(paste("Correlation Coefficient (r) for ", delta ^{13},"C ",
                     "\u0028","\u2030","\u0029")))

points(WW_corr$South_N15, WW_corr$South_C13, pch = 23, cex = 1.25, 
       bg ="antiquewhite4", col = "antiquewhite4")
points(WW_corr$North_N15, WW_corr$North_C13, pch = 15, cex = 1.25,
       bg ="black")
axis(1, at = seq(0, 1.0, by = 0.1), labels = F, tick = TRUE, tck = -0.01)
axis(2, at = seq(0, 1.0, by = 0.1), labels = F, tick = TRUE, tck = -0.01)
abline(h=.86, v=.86, col = "gray60", lty = 2)
legend("topleft", c("North", "South"), pch = c(15, 23), 
       col = c("black", "antiquewhite4"), pt.bg = c("black", "antiquewhite4"),
       horiz=TRUE, bty = "n")

par(opar)

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评论(2

停滞 2025-02-07 13:26:32
par(pty="s")
plot(...)

将情节类型设置为正方形,在您的情况下,它将完成工作(我认为),因为您的X和Y范围是相同的。相当隐藏的选项已记录在?par中。

par(pty="s")
plot(...)

sets the plot type to be square, which will do the job (I think) in your case because your x and y ranges are the same. Fairly well hidden option documented in ?par.

对风讲故事 2025-02-07 13:26:32

使用asp = 1作为绘图的参数,将由低级绘图来解释。窗口调用,应为您提供单一的长宽比。使用Ylim和Xlim的调用可能与纵横比分类相抵触,而ASP应该“占上风”。这是一个令人印象深刻的第一r图。以及一个很好的问题构造。高分。

一个令人震惊的说明是您使用构造xlim = c(0:1.0)。由于Xlim期望有两个元素向量,因此我会期望Xlim = C(0,1)。如果您更改为不同的限制,则击键较少,并且将来会遇到错误,因为“操作员”尝试使用“ 0:2.5”,将为您带来意外的结果。

Using asp=1 as a parameter to plot will get interpreted by the low-level plot.window call and should give you a unitary aspect ratio. There is the potential that a call using ylim and xlim could conflict with an aspect ratio scpecification and the asp should "prevail". That's a very impressive first R graph, by the away. And an excellent question construction. High marks.

The one jarring note was your use of the construction xlim=c(0:1.0). Since xlim expects a two element vector, I would have expected xlim=c(0,1). Fewer keystrokes and less subject to error in the future if you changed to a different set of limits, since the ":" operator would give you unexpected results if you tried that with "0:2.5".

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