如何将一组仅具有文件名的类似文件重命名？

发布于 2025-01-27 14:03:55 字数 733 浏览 2 评论 0原文

我有一组文件：

Ursus_fibroblast_ACT_34_CT0_adak_HJ_EV_S45_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT12_adak_HJ_EV_S49_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT0_adak_HJ_EV_S45_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT12_adak_HJ_EV_S49_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT15_adak_HJ_EV_S50_L002_R1_001_val_1.fq.gzAligned.out.sam

我只想将它们重命名，并将其重命名，以及扩展名为“ aligned.out.ut.sam”：

“ act_34_ct15_adak_hj_ev_s50”“ act_34_ct12_adak_adak_hj_ev_s49”等等。

到目前为止，我已经开始了一个脚本的开始，但是我不确定现在该做什么。...我显然是对编码的新手，因此，如果您需要更多信息，请告诉我。

files={*.sam}
for i in $files
    echo $i
    mv -i $i

原文

I have a group of files:

Ursus_fibroblast_ACT_34_CT0_adak_HJ_EV_S45_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT12_adak_HJ_EV_S49_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT0_adak_HJ_EV_S45_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT12_adak_HJ_EV_S49_L002_R1_001_val_1.fq.gzAligned.out.sam
Ursus_fibroblast_ACT_34_CT15_adak_HJ_EV_S50_L002_R1_001_val_1.fq.gzAligned.out.sam

I would like to rename them with only this part of the name plus the extension "Aligned.out.sam":

"ACT_34_CT15_adak_HJ_EV_S50" "ACT_34_CT12_adak_HJ_EV_S49" and so on.

I have a start of a script so far but I am unsure of what to do now....I am obviously new to coding so if you need more information please let me know.

files={*.sam}
for i in $files
    echo $i
    mv -i $i

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你另情深 2025-02-03 14:03:55

如果您的文件在同一目录中，则该命令将完成工作。

for x in *.sam; do mv $x ${x%.sam}.Aligned.out.sam;done

If your files are in the same directory this command will do the job.

for x in *.sam; do mv $x ${x%.sam}.Aligned.out.sam;done

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未蓝澄海的烟 2025-02-03 14:03:55

while read file
do
  target=${file//Ursus_fibroblast_}
  target=${target//_L002*}
  echo mv "$file" "$target.Aligned.out.sam" # this is an echo
done < <(find . -type f -name "*.sam")

mv ./Ursus_fibroblast_ACT_34_CT0_adak_HJ_EV_S45_L002_R1_001_val_1.fq.gzAligned.out.sam ./ACT_34_CT0_adak_HJ_EV_S45.Aligned.out.sam
mv ./Ursus_fibroblast_ACT_34_CT12_adak_HJ_EV_S49_L002_R1_001_val_1.fq.gzAligned.out.sam ./ACT_34_CT12_adak_HJ_EV_S49.Aligned.out.sam
mv ./Ursus_fibroblast_ACT_34_CT15_adak_HJ_EV_S50_L002_R1_001_val_1.fq.gzAligned.out.sam ./ACT_34_CT15_adak_HJ_EV_S50.Aligned.out.sam

while read file
do
  target=${file//Ursus_fibroblast_}
  target=${target//_L002*}
  echo mv "$file" "$target.Aligned.out.sam" # this is an echo
done < <(find . -type f -name "*.sam")

mv ./Ursus_fibroblast_ACT_34_CT0_adak_HJ_EV_S45_L002_R1_001_val_1.fq.gzAligned.out.sam ./ACT_34_CT0_adak_HJ_EV_S45.Aligned.out.sam
mv ./Ursus_fibroblast_ACT_34_CT12_adak_HJ_EV_S49_L002_R1_001_val_1.fq.gzAligned.out.sam ./ACT_34_CT12_adak_HJ_EV_S49.Aligned.out.sam
mv ./Ursus_fibroblast_ACT_34_CT15_adak_HJ_EV_S50_L002_R1_001_val_1.fq.gzAligned.out.sam ./ACT_34_CT15_adak_HJ_EV_S50.Aligned.out.sam

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~没有更多了~