如何在 R 闪亮的数据表顶部添加过滤器?
这个闪亮的应用程序概述: 这个闪亮的应用程序采用多个 .xpt 文件,并在面板左侧创建基于列的过滤器(STUDYID、DOMAIN、VALUE、SEQ)。 我不想使用侧面板,而是想将列过滤器移动到数据表的顶部以匹配其列。
注意:阅读我之前的文章后,这是扩展的问题:如何在 R闪亮中显示多个.xpt文件并根据它们的列过滤它们?
数据:
xpt1:
STUDYID DOMAIN CR_VALUE
1 CR 1.5
2 CR 1.5
3 CR 1.5
xpt2
STUDYID DOMAIN CM_VALUE
1 CM 1.5
2 CM 1.8
3 CR 1.9
代码
library(shiny)
library(haven)
library(stringr)
library(shinyWidgets)
library(tidyverse)
ui <- fluidPage(
sidebarLayout(
sidebarPanel(
fileInput("file1", "Choose CSV File",
multiple = TRUE,
accept = c(
"text/csv",
"text/comma-separated-values,text/plain",
".csv", ".xpt"
)
),
tags$hr(),
checkboxInput("header", "Header", TRUE),
uiOutput("files_available"),
uiOutput("filters")
),
mainPanel(
uiOutput("tables")
)
)
)
server <- function(input, output) {
nms <- reactiveVal(NULL)
suffixes <- c("STUDYID", "DOMAIN", "VALUE", "SEQ")
df <- reactive({
req(input$file1)
input$file1$datapath %>%
map(~ read_xpt(.x))
})
# for debugging
observe({
print(df())
# print(nms())
# print(map(names(input), ~input[[.x]]))
})
observeEvent(df(), {
nms(map(df(), names))
})
output$filters <- renderUI({
req(df())
inpts <- tagList(
numericInput("STUDYID", "STUDYID", value = NA),
textInput("DOMAIN", "DOMAIN", value = ""),
numericInput("VALUE", "VALUE", value = NA),
numericInput("SEQ", "SEQ", value = NA)
)
})
output$tables <- renderUI({
req(df())
map(1:length(df()), ~ tableOutput(str_c("table", .x)))
})
observeEvent(c(input$STUDYID, input$DOMAIN, input$VALUE, input$SEQ), {
df <- df()
# df contains multiple dataframes so we need to loop through each of them to create the render functions
walk(1:length(df), ~ {
output[[str_c("table", .x)]] <<- renderTable({
cur_df <- df[[.x]]
nms <- nms()[[.x]]
nms <- map(suffixes, ~ str_subset(nms, .)) # to order the correct column names with the required input. Warning, if more than one name matches the suffix is not tested
# first we look if the input is character type and force a NA value on it, if it's not we just look for NA.
# If the input is not NA (meaning that is has a value inserted by the user), then filter the table by that value.
walk2(nms, suffixes, ~ {
if (class(input[[.y]]) == "character") {
if (input[[.y]] == "") {
input_value <- NA
} else {
input_value <- input[[.y]]
}
} else {
input_value <- input[[.y]]
} # empty textInput's show has an empty string value instead of NA
print(input_value)
if (!is.na(input_value)) {
cur_df <<- cur_df %>% filter(.data[[.x]] == input[[.y]])
}
})
cur_df
})
})
})
}
shinyApp(ui, server)
Overview of this Shiny App:
This r shiny app takes multiple .xpt files and creates column-based filters on the left side of the panel (STUDYID, DOMAIN, VALUE, SEQ).
Instead of using the side panel, I'd like to move the column filters to the top of the datatable to match its columns.
Note: After reading my earlier article, this is the expanded question:How can I display multiple.xpt files in R shiny and filter them based on their columns?
Data:
xpt1:
STUDYID DOMAIN CR_VALUE
1 CR 1.5
2 CR 1.5
3 CR 1.5
xpt2
STUDYID DOMAIN CM_VALUE
1 CM 1.5
2 CM 1.8
3 CR 1.9
code
library(shiny)
library(haven)
library(stringr)
library(shinyWidgets)
library(tidyverse)
ui <- fluidPage(
sidebarLayout(
sidebarPanel(
fileInput("file1", "Choose CSV File",
multiple = TRUE,
accept = c(
"text/csv",
"text/comma-separated-values,text/plain",
".csv", ".xpt"
)
),
tags$hr(),
checkboxInput("header", "Header", TRUE),
uiOutput("files_available"),
uiOutput("filters")
),
mainPanel(
uiOutput("tables")
)
)
)
server <- function(input, output) {
nms <- reactiveVal(NULL)
suffixes <- c("STUDYID", "DOMAIN", "VALUE", "SEQ")
df <- reactive({
req(input$file1)
input$file1$datapath %>%
map(~ read_xpt(.x))
})
# for debugging
observe({
print(df())
# print(nms())
# print(map(names(input), ~input[[.x]]))
})
observeEvent(df(), {
nms(map(df(), names))
})
output$filters <- renderUI({
req(df())
inpts <- tagList(
numericInput("STUDYID", "STUDYID", value = NA),
textInput("DOMAIN", "DOMAIN", value = ""),
numericInput("VALUE", "VALUE", value = NA),
numericInput("SEQ", "SEQ", value = NA)
)
})
output$tables <- renderUI({
req(df())
map(1:length(df()), ~ tableOutput(str_c("table", .x)))
})
observeEvent(c(input$STUDYID, input$DOMAIN, input$VALUE, input$SEQ), {
df <- df()
# df contains multiple dataframes so we need to loop through each of them to create the render functions
walk(1:length(df), ~ {
output[[str_c("table", .x)]] <<- renderTable({
cur_df <- df[[.x]]
nms <- nms()[[.x]]
nms <- map(suffixes, ~ str_subset(nms, .)) # to order the correct column names with the required input. Warning, if more than one name matches the suffix is not tested
# first we look if the input is character type and force a NA value on it, if it's not we just look for NA.
# If the input is not NA (meaning that is has a value inserted by the user), then filter the table by that value.
walk2(nms, suffixes, ~ {
if (class(input[[.y]]) == "character") {
if (input[[.y]] == "") {
input_value <- NA
} else {
input_value <- input[[.y]]
}
} else {
input_value <- input[[.y]]
} # empty textInput's show has an empty string value instead of NA
print(input_value)
if (!is.na(input_value)) {
cur_df <<- cur_df %>% filter(.data[[.x]] == input[[.y]])
}
})
cur_df
})
})
})
}
shinyApp(ui, server)
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