01. Python 工具
02. Python 基础
03. Numpy
- Numpy 简介
- Matplotlib 基础
- Numpy 数组及其索引
- 数组类型
- 数组方法
- 数组排序
- 数组形状
- 对角线
- 数组与字符串的转换
- 数组属性方法总结
- 生成数组的函数
- 矩阵
- 一般函数
- 向量化函数
- 二元运算
- ufunc 对象
- choose 函数实现条件筛选
- 数组广播机制
- 数组读写
- 结构化数组
- 记录数组
- 内存映射
- 从 Matlab 到 Numpy
04. Scipy
05. Python 进阶
- sys 模块简介
- 与操作系统进行交互:os 模块
- CSV 文件和 csv 模块
- 正则表达式和 re 模块
- datetime 模块
- SQL 数据库
- 对象关系映射
- 函数进阶:参数传递,高阶函数,lambda 匿名函数,global 变量,递归
- 迭代器
- 生成器
- with 语句和上下文管理器
- 修饰符
- 修饰符的使用
- operator, functools, itertools, toolz, fn, funcy 模块
- 作用域
- 动态编译
06. Matplotlib
- Pyplot 教程
- 使用 style 来配置 pyplot 风格
- 处理文本(基础)
- 处理文本(数学表达式)
- 图像基础
- 注释
- 标签
- figures, subplots, axes 和 ticks 对象
- 不要迷信默认设置
- 各种绘图实例
07. 使用其他语言进行扩展
- 简介
- Python 扩展模块
- Cython:Cython 基础,将源代码转换成扩展模块
- Cython:Cython 语法,调用其他C库
- Cython:class 和 cdef class,使用 C++
- Cython:Typed memoryviews
- 生成编译注释
- ctypes
08. 面向对象编程
09. Theano 基础
- Theano 简介及其安装
- Theano 基础
- Theano 在 Windows 上的配置
- Theano 符号图结构
- Theano 配置和编译模式
- Theano 条件语句
- Theano 循环:scan(详解)
- Theano 实例:线性回归
- Theano 实例:Logistic 回归
- Theano 实例:Softmax 回归
- Theano 实例:人工神经网络
- Theano 随机数流变量
- Theano 实例:更复杂的网络
- Theano 实例:卷积神经网络
- Theano tensor 模块:基础
- Theano tensor 模块:索引
- Theano tensor 模块:操作符和逐元素操作
- Theano tensor 模块:nnet 子模块
- Theano tensor 模块:conv 子模块
10. 有趣的第三方模块
11. 有用的工具
- pprint 模块:打印 Python 对象
- pickle, cPickle 模块:序列化 Python 对象
- json 模块:处理 JSON 数据
- glob 模块:文件模式匹配
- shutil 模块:高级文件操作
- gzip, zipfile, tarfile 模块:处理压缩文件
- logging 模块:记录日志
- string 模块:字符串处理
- collections 模块:更多数据结构
- requests 模块:HTTP for Human
12. Pandas
Theano 配置和编译模式
配置
之前我们已经知道, theano
的配置可以用 config
模块来查看:
In [1]:
import theano
import theano.tensor as T
print theano.config
floatX (('float64', 'float32', 'float16'))
Doc: Default floating-point precision for python casts.
Note: float16 support is experimental, use at your own risk.
Value: float32
warn_float64 (('ignore', 'warn', 'raise', 'pdb'))
Doc: Do an action when a tensor variable with float64 dtype is created. They can't be run on the GPU with the current(old) gpu back-end and are slow with gamer GPUs.
Value: ignore
cast_policy (('custom', 'numpy+floatX'))
Doc: Rules for implicit type casting
Value: custom
int_division (('int', 'raise', 'floatX'))
Doc: What to do when one computes x / y, where both x and y are of integer types
Value: int
device (cpu, gpu*, opencl*, cuda*)
Doc: Default device for computations. If gpu*, change the default to try to move computation to it and to put shared variable of float32 on it. Do not use upper case letters, only lower case even if NVIDIA use capital letters.
Value: gpu1
init_gpu_device (, gpu*, opencl*, cuda*)
Doc: Initialize the gpu device to use, works only if device=cpu. Unlike 'device', setting this option will NOT move computations, nor shared variables, to the specified GPU. It can be used to run GPU-specific tests on a particular GPU.
Value:
force_device (<function booltype at 0x7f1125276d70>)
Doc: Raise an error if we can't use the specified device
Value: False
<theano.configdefaults.ContextsParam object at 0x7f1129423090>
Doc:
Context map for multi-gpu operation. Format is a
semicolon-separated list of names and device names in the
'name->dev_name' format. An example that would map name 'test' to
device 'cuda0' and name 'test2' to device 'opencl0:0' follows:
"test->cuda0;test2->opencl0:0".
Invalid context names are 'cpu', 'cuda*' and 'opencl*'
Value:
print_active_device (<function booltype at 0x7f1125279050>)
Doc: Print active device at when the GPU device is initialized.
Value: True
enable_initial_driver_test (<function booltype at 0x7f11252791b8>)
Doc: Tests the nvidia driver when a GPU device is initialized.
Value: True
cuda.root (<type 'str'>)
Doc: directory with bin/, lib/, include/ for cuda utilities.
This directory is included via -L and -rpath when linking
dynamically compiled modules. If AUTO and nvcc is in the
path, it will use one of nvcc parent directory. Otherwise
/usr/local/cuda will be used. Leave empty to prevent extra
linker directives. Default: environment variable "CUDA_ROOT"
or else "AUTO".
Value: /usr/local/cuda-7.0
<theano.configparser.ConfigParam object at 0x7f1129423450>
Doc: Extra compiler flags for nvcc
Value:
nvcc.compiler_bindir (<type 'str'>)
Doc: If defined, nvcc compiler driver will seek g++ and gcc in this directory
Value:
nvcc.fastmath (<function booltype at 0x7f1125279500>)
Doc:
Value: False
gpuarray.sync (<function booltype at 0x7f1125279668>)
Doc: If True, every op will make sure its work is done before
returning. Setting this to True will slow down execution,
but give much more accurate results in profiling.
Value: False
gpuarray.preallocate (<type 'float'>)
Doc: If 0 it doesn't do anything. If between 0 and 1 it
will preallocate that fraction of the total GPU memory.
If 1 or greater it will preallocate that amount of memory
(in megabytes).
Value: 0.0
<theano.configparser.ConfigParam object at 0x7f11252e5710>
Doc: This flag is deprecated; use dnn.conv.algo_fwd.
Value: True
<theano.configparser.ConfigParam object at 0x7f11252e57d0>
Doc: This flag is deprecated; use dnn.conv.algo_bwd.
Value: True
<theano.configparser.ConfigParam object at 0x7f11252e5810>
Doc: This flag is deprecated; use dnn.conv.algo_bwd_data and dnn.conv.algo_bwd_filter.
Value: True
dnn.conv.algo_fwd (('small', 'none', 'large', 'fft', 'fft_tiling', 'guess_once', 'guess_on_shape_change', 'time_once', 'time_on_shape_change'))
Doc: Default implementation to use for CuDNN forward convolution.
Value: small
dnn.conv.algo_bwd_data (('none', 'deterministic', 'fft', 'fft_tiling', 'guess_once', 'guess_on_shape_change', 'time_once', 'time_on_shape_change'))
Doc: Default implementation to use for CuDNN backward convolution to get the gradients of the convolution with regard to the inputs.
Value: none
dnn.conv.algo_bwd_filter (('none', 'deterministic', 'fft', 'small', 'guess_once', 'guess_on_shape_change', 'time_once', 'time_on_shape_change'))
Doc: Default implementation to use for CuDNN backward convolution to get the gradients of the convolution with regard to the filters.
Value: none
dnn.conv.precision (('as_input', 'float16', 'float32', 'float64'))
Doc: Default data precision to use for the computation in CuDNN convolutions (defaults to the same dtype as the inputs of the convolutions).
Value: as_input
dnn.include_path (<type 'str'>)
Doc: Location of the cudnn header (defaults to the cuda root)
Value: /usr/local/cuda-7.0/include
dnn.library_path (<type 'str'>)
Doc: Location of the cudnn header (defaults to the cuda root)
Value: /usr/local/cuda-7.0/lib64
assert_no_cpu_op (('ignore', 'warn', 'raise', 'pdb'))
Doc: Raise an error/warning if there is a CPU op in the computational graph.
Value: ignore
mode (('Mode', 'ProfileMode', 'DebugMode', 'FAST_RUN', 'NanGuardMode', 'FAST_COMPILE', 'PROFILE_MODE', 'DEBUG_MODE'))
Doc: Default compilation mode
Value: Mode
cxx (<type 'str'>)
Doc: The C++ compiler to use. Currently only g++ is supported, but supporting additional compilers should not be too difficult. If it is empty, no C++ code is compiled.
Value: /usr/bin/g++
linker (('cvm', 'c|py', 'py', 'c', 'c|py_nogc', 'vm', 'vm_nogc', 'cvm_nogc'))
Doc: Default linker used if the theano flags mode is Mode or ProfileMode(deprecated)
Value: cvm
allow_gc (<function booltype at 0x7f112527b5f0>)
Doc: Do we default to delete intermediate results during Theano function calls? Doing so lowers the memory requirement, but asks that we reallocate memory at the next function call. This is implemented for the default linker, but may not work for all linkers.
Value: True
optimizer (('fast_run', 'merge', 'fast_compile', 'None'))
Doc: Default optimizer. If not None, will use this linker with the Mode object (not ProfileMode(deprecated) or DebugMode)
Value: fast_run
optimizer_verbose (<function booltype at 0x7f112527b7d0>)
Doc: If True, we print all optimization being applied
Value: False
on_opt_error (('warn', 'raise', 'pdb', 'ignore'))
Doc: What to do when an optimization crashes: warn and skip it, raise the exception, or fall into the pdb debugger.
Value: warn
<theano.configparser.ConfigParam object at 0x7f11252e5c90>
Doc: This config option was removed in 0.5: do not use it!
Value: True
nocleanup (<function booltype at 0x7f112527ba28>)
Doc: Suppress the deletion of code files that did not compile cleanly
Value: False
on_unused_input (('raise', 'warn', 'ignore'))
Doc: What to do if a variable in the 'inputs' list of theano.function() is not used in the graph.
Value: raise
tensor.cmp_sloppy (<type 'int'>)
Doc: Relax tensor._allclose (0) not at all, (1) a bit, (2) more
Value: 0
tensor.local_elemwise_fusion (<function booltype at 0x7f112527bcf8>)
Doc: Enable or not in fast_run mode(fast_run optimization) the elemwise fusion optimization
Value: True
gpu.local_elemwise_fusion (<function booltype at 0x7f112527be60>)
Doc: Enable or not in fast_run mode(fast_run optimization) the gpu elemwise fusion optimization
Value: True
lib.amdlibm (<function booltype at 0x7f112527f050>)
Doc: Use amd's amdlibm numerical library
Value: False
gpuelemwise.sync (<function booltype at 0x7f112527f1b8>)
Doc: when true, wait that the gpu fct finished and check it error code.
Value: True
traceback.limit (<type 'int'>)
Doc: The number of stack to trace. -1 mean all.
Value: 8
experimental.mrg (<function booltype at 0x7f112527f398>)
Doc: Another random number generator that work on the gpu
Value: False
experimental.unpickle_gpu_on_cpu (<function booltype at 0x7f112527f500>)
Doc: Allow unpickling of pickled CudaNdarrays as numpy.ndarrays.This is useful, if you want to open a CudaNdarray without having cuda installed.If you have cuda installed, this will force unpickling tobe done on the cpu to numpy.ndarray.Please be aware that this may get you access to the data,however, trying to unpicke gpu functions will not succeed.This flag is experimental and may be removed any time, whengpu<>cpu transparency is solved.
Value: False
numpy.seterr_all (('ignore', 'warn', 'raise', 'call', 'print', 'log', 'None'))
Doc: ("Sets numpy's behaviour for floating-point errors, ", "see numpy.seterr. 'None' means not to change numpy's default, which can be different for different numpy releases. This flag sets the default behaviour for all kinds of floating-point errors, its effect can be overriden for specific errors by the following flags: seterr_divide, seterr_over, seterr_under and seterr_invalid.")
Value: ignore
numpy.seterr_divide (('None', 'ignore', 'warn', 'raise', 'call', 'print', 'log'))
Doc: Sets numpy's behavior for division by zero, see numpy.seterr. 'None' means using the default, defined by numpy.seterr_all.
Value: None
numpy.seterr_over (('None', 'ignore', 'warn', 'raise', 'call', 'print', 'log'))
Doc: Sets numpy's behavior for floating-point overflow, see numpy.seterr. 'None' means using the default, defined by numpy.seterr_all.
Value: None
numpy.seterr_under (('None', 'ignore', 'warn', 'raise', 'call', 'print', 'log'))
Doc: Sets numpy's behavior for floating-point underflow, see numpy.seterr. 'None' means using the default, defined by numpy.seterr_all.
Value: None
numpy.seterr_invalid (('None', 'ignore', 'warn', 'raise', 'call', 'print', 'log'))
Doc: Sets numpy's behavior for invalid floating-point operation, see numpy.seterr. 'None' means using the default, defined by numpy.seterr_all.
Value: None
warn.ignore_bug_before (('0.6', 'None', 'all', '0.3', '0.4', '0.4.1', '0.5', '0.7'))
Doc: If 'None', we warn about all Theano bugs found by default. If 'all', we don't warn about Theano bugs found by default. If a version, we print only the warnings relative to Theano bugs found after that version. Warning for specific bugs can be configured with specific [warn] flags.
Value: 0.6
warn.argmax_pushdown_bug (<function booltype at 0x7f112527fa28>)
Doc: Warn if in past version of Theano we generated a bug with the theano.tensor.nnet.nnet.local_argmax_pushdown optimization. Was fixed 27 may 2010
Value: False
warn.gpusum_01_011_0111_bug (<function booltype at 0x7f112527fb90>)
Doc: Warn if we are in a case where old version of Theano had a silent bug with GpuSum pattern 01,011 and 0111 when the first dimensions was bigger then 4096\. Was fixed 31 may 2010
Value: False
warn.sum_sum_bug (<function booltype at 0x7f112527fcf8>)
Doc: Warn if we are in a case where Theano version between version 9923a40c7b7a and the 2 august 2010 (fixed date), generated an error in that case. This happens when there are 2 consecutive sums in the graph, bad code was generated. Was fixed 2 August 2010
Value: False
warn.sum_div_dimshuffle_bug (<function booltype at 0x7f112527fe60>)
Doc: Warn if previous versions of Theano (between rev. 3bd9b789f5e8, 2010-06-16, and cfc6322e5ad4, 2010-08-03) would have given incorrect result. This bug was triggered by sum of division of dimshuffled tensors.
Value: False
warn.subtensor_merge_bug (<function booltype at 0x7f1125284050>)
Doc: Warn if previous versions of Theano (before 0.5rc2) could have given incorrect results when indexing into a subtensor with negative stride (for instance, for instance, x[a:b:-1][c]).
Value: False
warn.gpu_set_subtensor1 (<function booltype at 0x7f11252841b8>)
Doc: Warn if previous versions of Theano (before 0.6) could have given incorrect results when moving to the gpu set_subtensor(x[int vector], new_value)
Value: False
warn.vm_gc_bug (<function booltype at 0x7f1125284320>)
Doc: There was a bug that existed in the default Theano configuration, only in the development version between July 5th 2012 and July 30th 2012\. This was not in a released version. If your code was affected by this bug, a warning will be printed during the code execution if you use the `linker=vm,vm.lazy=True,warn.vm_gc_bug=True` Theano flags. This warning is disabled by default as the bug was not released.
Value: False
warn.signal_conv2d_interface (<function booltype at 0x7f1125284488>)
Doc: Warn we use the new signal.conv2d() when its interface changed mid June 2014
Value: True
warn.reduce_join (<function booltype at 0x7f11252845f0>)
Doc: Your current code is fine, but Theano versions prior to 0.7 (or this development version) might have given an incorrect result. To disable this warning, set the Theano flag warn.reduce_join to False. The problem was an optimization, that modified the pattern "Reduce{scalar.op}(Join(axis=0, a, b), axis=0)", did not check the reduction axis. So if the reduction axis was not 0, you got a wrong answer.
Value: True
warn.inc_set_subtensor1 (<function booltype at 0x7f1125284758>)
Doc: Warn if previous versions of Theano (before 0.7) could have given incorrect results for inc_subtensor and set_subtensor when using some patterns of advanced indexing (indexing with one vector or matrix of ints).
Value: True
compute_test_value (('off', 'ignore', 'warn', 'raise', 'pdb'))
Doc: If 'True', Theano will run each op at graph build time, using Constants, SharedVariables and the tag 'test_value' as inputs to the function. This helps the user track down problems in the graph before it gets optimized.
Value: off
print_test_value (<function booltype at 0x7f1125284938>)
Doc: If 'True', the __eval__ of a Theano variable will return its test_value when this is available. This has the practical conseguence that, e.g., in debugging `my_var` will print the same as `my_var.tag.test_value` when a test value is defined.
Value: False
compute_test_value_opt (('off', 'ignore', 'warn', 'raise', 'pdb'))
Doc: For debugging Theano optimization only. Same as compute_test_value, but is used during Theano optimization
Value: off
unpickle_function (<function booltype at 0x7f1125284b18>)
Doc: Replace unpickled Theano functions with None. This is useful to unpickle old graphs that pickled them when it shouldn't
Value: True
reoptimize_unpickled_function (<function booltype at 0x7f1125284c80>)
Doc: Re-optimize the graph when a theano function is unpickled from the disk.
Value: False
exception_verbosity (('low', 'high'))
Doc: If 'low', the text of exceptions will generally refer to apply nodes with short names such as Elemwise{add_no_inplace}. If 'high', some exceptions will also refer to apply nodes with long descriptions like:
A. Elemwise{add_no_inplace}
B. log_likelihood_v_given_h
C. log_likelihood_h
Value: low
openmp (<function booltype at 0x7f1125284e60>)
Doc: Allow (or not) parallel computation on the CPU with OpenMP. This is the default value used when creating an Op that supports OpenMP parallelization. It is preferable to define it via the Theano configuration file ~/.theanorc or with the environment variable THEANO_FLAGS. Parallelization is only done for some operations that implement it, and even for operations that implement parallelism, each operation is free to respect this flag or not. You can control the number of threads used with the environment variable OMP_NUM_THREADS. If it is set to 1, we disable openmp in Theano by default.
Value: False
openmp_elemwise_minsize (<type 'int'>)
Doc: If OpenMP is enabled, this is the minimum size of vectors for which the openmp parallelization is enabled in element wise ops.
Value: 200000
check_input (<function booltype at 0x7f11252870c8>)
Doc: Specify if types should check their input in their C code. It can be used to speed up compilation, reduce overhead (particularly for scalars) and reduce the number of generated C files.
Value: True
cache_optimizations (<function booltype at 0x7f1125287230>)
Doc: WARNING: work in progress, does not work yet. Specify if the optimization cache should be used. This cache will any optimized graph and its optimization. Actually slow downs a lot the first optimization, and could possibly still contains some bugs. Use at your own risks.
Value: False
unittests.rseed (<type 'str'>)
Doc: Seed to use for randomized unit tests. Special value 'random' means using a seed of None.
Value: 666
compile.wait (<type 'int'>)
Doc: Time to wait before retrying to aquire the compile lock.
Value: 5
compile.timeout (<type 'int'>)
Doc: In seconds, time that a process will wait before deciding to
override an existing lock. An override only happens when the existing
lock is held by the same owner *and* has not been 'refreshed' by this
owner for more than this period. Refreshes are done every half timeout
period for running processes.
Value: 120
compiledir_format (<type 'str'>)
Doc: Format string for platform-dependent compiled module subdirectory
(relative to base_compiledir). Available keys: gxx_version, hostname,
numpy_version, platform, processor, python_bitwidth,
python_int_bitwidth, python_version, short_platform, theano_version.
Defaults to 'compiledir_%(short_platform)s-%(processor)s-%(python_vers
ion)s-%(python_bitwidth)s'.
Value: compiledir_%(short_platform)s-%(processor)s-%(python_version)s-%(python_bitwidth)s
<theano.configparser.ConfigParam object at 0x7f110f7f8f90>
Doc: platform-independent root directory for compiled modules
Value: /home/lijin/.theano
<theano.configparser.ConfigParam object at 0x7f110f80c050>
Doc: platform-dependent cache directory for compiled modules
Value: /home/lijin/.theano/compiledir_Linux-3.13--generic-x86_64-with-Ubuntu-14.04-trusty-x86_64-2.7.6-64
cmodule.mac_framework_link (<function booltype at 0x7f110f802cf8>)
Doc: If set to True, breaks certain MacOS installations with the infamous Bus Error
Value: False
cmodule.warn_no_version (<function booltype at 0x7f110f802e60>)
Doc: If True, will print a warning when compiling one or more Op with C code that can't be cached because there is no c_code_cache_version() function associated to at least one of those Ops.
Value: False
cmodule.remove_gxx_opt (<function booltype at 0x7f110f80b050>)
Doc: If True, will remove the -O* parameter passed to g++.This is useful to debug in gdb modules compiled by Theano.The parameter -g is passed by default to g++
Value: False
cmodule.compilation_warning (<function booltype at 0x7f110f80b1b8>)
Doc: If True, will print compilation warnings.
Value: False
cmodule.preload_cache (<function booltype at 0x7f110f80b320>)
Doc: If set to True, will preload the C module cache at import time
Value: False
gcc.cxxflags (<type 'str'>)
Doc: Extra compiler flags for gcc
Value:
metaopt.verbose (<function booltype at 0x7f110f7e0ed8>)
Doc: Enable verbose output for meta optimizers
Value: False
optdb.position_cutoff (<type 'float'>)
Doc: Where to stop eariler during optimization. It represent the position of the optimizer where to stop.
Value: inf
optdb.max_use_ratio (<type 'float'>)
Doc: A ratio that prevent infinite loop in EquilibriumOptimizer.
Value: 5.0
profile (<function booltype at 0x7f110f7825f0>)
Doc: If VM should collect profile information
Value: False
profile_optimizer (<function booltype at 0x7f110f782758>)
Doc: If VM should collect optimizer profile information
Value: False
profile_memory (<function booltype at 0x7f110f7828c0>)
Doc: If VM should collect memory profile information and print it
Value: False
<theano.configparser.ConfigParam object at 0x7f110f79bc50>
Doc: Useful only for the vm linkers. When lazy is None, auto detect if lazy evaluation is needed and use the apropriate version. If lazy is True/False, force the version used between Loop/LoopGC and Stack.
Value: None
optimizer_excluding (<type 'str'>)
Doc: When using the default mode, we will remove optimizer with these tags. Separate tags with ':'.
Value:
optimizer_including (<type 'str'>)
Doc: When using the default mode, we will add optimizer with these tags. Separate tags with ':'.
Value:
optimizer_requiring (<type 'str'>)
Doc: When using the default mode, we will require optimizer with these tags. Separate tags with ':'.
Value:
DebugMode.patience (<type 'int'>)
Doc: Optimize graph this many times to detect inconsistency
Value: 10
DebugMode.check_c (<function booltype at 0x7f110f74a8c0>)
Doc: Run C implementations where possible
Value: True
DebugMode.check_py (<function booltype at 0x7f110f74aa28>)
Doc: Run Python implementations where possible
Value: True
DebugMode.check_finite (<function booltype at 0x7f110f74ab90>)
Doc: True -> complain about NaN/Inf results
Value: True
DebugMode.check_strides (<type 'int'>)
Doc: Check that Python- and C-produced ndarrays have same strides. On difference: (0) - ignore, (1) warn, or (2) raise error
Value: 0
DebugMode.warn_input_not_reused (<function booltype at 0x7f110f74ade8>)
Doc: Generate a warning when destroy_map or view_map says that an op works inplace, but the op did not reuse the input for its output.
Value: True
DebugMode.check_preallocated_output (<type 'str'>)
Doc: Test thunks with pre-allocated memory as output storage. This is a list of strings separated by ":". Valid values are: "initial" (initial storage in storage map, happens with Scan),"previous" (previously-returned memory), "c_contiguous", "f_contiguous", "strided" (positive and negative strides), "wrong_size" (larger and smaller dimensions), and "ALL" (all of the above).
Value:
DebugMode.check_preallocated_output_ndim (<type 'int'>)
Doc: When testing with "strided" preallocated output memory, test all combinations of strides over that number of (inner-most) dimensions. You may want to reduce that number to reduce memory or time usage, but it is advised to keep a minimum of 2.
Value: 4
profiling.time_thunks (<function booltype at 0x7f110ef81320>)
Doc: Time individual thunks when profiling
Value: True
profiling.n_apply (<type 'int'>)
Doc: Number of Apply instances to print by default
Value: 20
profiling.n_ops (<type 'int'>)
Doc: Number of Ops to print by default
Value: 20
profiling.output_line_width (<type 'int'>)
Doc: Max line width for the profiling output
Value: 512
profiling.min_memory_size (<type 'int'>)
Doc: For the memory profile, do not print Apply nodes if the size
of their outputs (in bytes) is lower than this threshold
Value: 1024
profiling.min_peak_memory (<function booltype at 0x7f110ef81848>)
Doc: The min peak memory usage of the order
Value: False
profiling.destination (<type 'str'>)
Doc:
File destination of the profiling output
Value: stderr
profiling.debugprint (<function booltype at 0x7f110ef81a28>)
Doc:
Do a debugprint of the profiled functions
Value: False
ProfileMode.n_apply_to_print (<type 'int'>)
Doc: Number of apply instances to print by default
Value: 15
ProfileMode.n_ops_to_print (<type 'int'>)
Doc: Number of ops to print by default
Value: 20
ProfileMode.min_memory_size (<type 'int'>)
Doc: For the memory profile, do not print apply nodes if the size of their outputs (in bytes) is lower then this threshold
Value: 1024
ProfileMode.profile_memory (<function booltype at 0x7f110ef90c80>)
Doc: Enable profiling of memory used by Theano functions
Value: False
on_shape_error (('warn', 'raise'))
Doc: warn: print a warning and use the default value. raise: raise an error
Value: warn
tensor.insert_inplace_optimizer_validate_nb (<type 'int'>)
Doc: -1: auto, if graph have less then 500 nodes 1, else 10
Value: -1
experimental.local_alloc_elemwise (<function booltype at 0x7f11065ed7d0>)
Doc: DEPRECATED: If True, enable the experimental optimization local_alloc_elemwise. Generates error if not True. Use optimizer_excluding=local_alloc_elemwise to dsiable.
Value: True
experimental.local_alloc_elemwise_assert (<function booltype at 0x7f11065ed848>)
Doc: When the local_alloc_elemwise is applied, add an assert to highlight shape errors.
Value: True
blas.ldflags (<type 'str'>)
Doc: lib[s] to include for [Fortran] level-3 blas implementation
Value: -lblas
warn.identify_1pexp_bug (<function booltype at 0x7f110653a5f0>)
Doc: Warn if Theano versions prior to 7987b51 (2011-12-18) could have yielded a wrong result due to a bug in the is_1pexp function
Value: False
scan.allow_gc (<function booltype at 0x7f11042e07d0>)
Doc: Allow/disallow gc inside of Scan (default: False)
Value: False
scan.allow_output_prealloc (<function booltype at 0x7f1104271668>)
Doc: Allow/disallow memory preallocation for outputs inside of scan (default: True)
Value: True
pycuda.init (<function booltype at 0x7f110429a2a8>)
Doc: If True, always initialize PyCUDA when Theano want to
initilize the GPU. Currently, we must always initialize
PyCUDA before Theano do it. Setting this flag to True,
ensure that, but always import PyCUDA. It can be done
manually by importing theano.misc.pycuda_init before theano
initialize the GPU device.
Value: False
cublas.lib (<type 'str'>)
Doc: Name of the cuda blas library for the linker.
Value: cublas
lib.cnmem (<type 'float'>)
Doc: Do we enable CNMeM or not (a faster CUDA memory allocator).
The parameter represent the start size (in MB or % of
total GPU memory) of the memory pool.
0: not enabled.
0 < N <= 1: % of the total GPU memory (clipped to .985 for driver memory)
> 0: use that number of MB of memory.
Value: 0.0
Using gpu device 1: Tesla K10.G2.8GB (CNMeM is disabled)
这些配置影响着 theano
的运行,很多的参数都是只读的,因此,我们应当尽量避免在程序中直接修改这些参数。
大部分参数都有指定的默认值,我们可以在 .theanorc
文件中对配置进行修改,也可以在环境变量 THEANO_FLAGS
中进行修改,它们的优先级顺序如下:
- 首先是对
theano.config.<property>
的赋值 - 然后是
THEANO_FLAGS
环境变量指定的内容 - 最后是
.theanorc
文件或者THEANORC
环境变量所指示的文件中的内容
具体的参数含义可以参考:
http://deeplearning.net/software/theano/library/config.html
环境变量 THEANO_FLAGS
使用 THEANO_FLAGS
环境变量,运行程序的方法如下:
THEANO_FLAGS='floatX=float32,device=gpu0,nvcc.fastmath=True' python <myscript>.py
如果是 window
下,则需要进行稍微的改动:
set THEANO_FLAGS='floatX=float32,device=gpu0,nvcc.fastmath=True' && python <myscript>.py
示例中的配置将浮点数的精度设为了 32
位,并将使用 GPU 0
和 CUDA
的 fastmath
模式进行编译和运算。
配置文件 THEANORC
环境变量 THEANORC
的默认位置为 $HOME/.theanorc
(windows
下为 $HOME/.theanorc:$HOME/.theanorc.txt
)。
与前面 THEANO_FLAGS
指定的内容相同的配置文件为:
[global]
floatX = float32
device = gpu0
[nvcc]
fastmath = True
这里 [golbal]
对应的是 config
中的参数,如 config.device, config.mode
; config
的子模块中的参数,如 config.nvcc.fastmath, config.blas.ldflags
则需要用 [nvcc], [blas]
的部分去设置。
模式
每次调用 theano.function
的时候,那些符号变量之间的结构会被优化和计算,而优化和计算的模式都是由 config.mode
所决定的。
Theano
中定义了这四种模式:
FAST_COMPILE
compile.mode.Mode(linker='py', optimizer='fast_compile')
Python
实现,构造很快,运行慢
FAST_RUN
compile.mode.Mode(linker='cvm', optimizer='fast_run')
C
实现,构造较慢,运行快
DebugMode
compile.debugmode.DebugMode()
- 调试模式,两种实现都可以
ProfileMode
compile.profilemode.ProfileMode()
C
实现,已经停用,使用theano.profile
替代
更多的细节,可以参考:
http://deeplearning.net/software/theano/library/compile/mode.html
Linkers
从上面的定义可以看出,一个模式由两部分构成,optimizer
和 linker
, ProfileMode
和 DebugMode
模式使用自带的 linker
。
可用的 linker
可以从下表中查看:
http://deeplearning.net/software/theano/tutorial/modes.html
使用 DebugMode
一般在使用 FAST_RUN
或者 FAST_COMPILE
模式之前,最好先用 DebugMode
进行调试,不过速度会比前两个模式慢得多。
我们用一个实例看一下两者的区别:
In [2]:
x = T.dvector('x')
f_1 = theano.function([x], 10 / x)
print f_1([5])
print f_1([0])
print f_1([7])
[ 2.]
[ inf]
[ 1.42857143]
在非 Debug 模式下,除以 0 是合法的,但是在 DebugMode
下,会给出错误,帮助我们进行调试:
In [3]:
f_2 = theano.function([x], 10 / x, mode='DebugMode')
print f_2([5])
print f_2([0])
print f_2([7])
[ 2.]
---------------------------------------------------------------------------
InvalidValueError Traceback (most recent call last)
<ipython-input-3-ad8c4ba988ad> in <module>()
2
3 print f_2([5])
----> 4 print f_2([0])
5 print f_2([7])
/usr/local/lib/python2.7/dist-packages/theano/compile/function_module.pyc in __call__(self, *args, **kwargs)
857 t0_fn = time.time()
858 try:
--> 859 outputs = self.fn()
860 except Exception:
861 if hasattr(self.fn, 'position_of_error'):
/usr/local/lib/python2.7/dist-packages/theano/compile/debugmode.pyc in deco()
2339 self.maker.mode.check_isfinite
2340 try:
-> 2341 return f()
2342 finally:
2343 # put back the filter_checks_isfinite
/usr/local/lib/python2.7/dist-packages/theano/compile/debugmode.pyc in f()
2079 raise InvalidValueError(r, storage_map[r][0],
2080 hint='perform output',
-> 2081 specific_hint=hint2) 2082 warn_inp = config.DebugMode.warn_input_not_reused
2083 py_inplace_outs = _check_inputs(
InvalidValueError: InvalidValueError
type(variable) = TensorType(float64, vector)
variable = Elemwise{true_div,no_inplace}.0
type(value) = <type 'numpy.ndarray'>
dtype(value) = float64
shape(value) = (1,)
value = [ inf]
min(value) = inf
max(value) = inf
isfinite = False
client_node = None
hint = perform output
specific_hint = non-finite elements not allowed
context = ...
Elemwise{true_div,no_inplace} [id A] ''
|TensorConstant{(1,) of 10.0} [id B]
|x [id C]
更多细节可以参考:
http://deeplearning.net/software/theano/library/compile/debugmode.html
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